Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GTF2A2P52657 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
GTF2A2P52657 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.41■□□□□ 0.86
GTF2A2P52657 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GTF2A2P52657 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GTF2A2P52657 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.41■□□□□ 0.86
GTF2A2P52657 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.41■□□□□ 0.86
GTF2A2P52657 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.41■□□□□ 0.86
GTF2A2P52657 OR7E47P-204ENST00000575924 449 ntBASIC20.41■□□□□ 0.86
GTF2A2P52657 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.41■□□□□ 0.86
GTF2A2P52657 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GTF2A2P52657 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.41■□□□□ 0.86
GTF2A2P52657 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
GTF2A2P52657 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GTF2A2P52657 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
GTF2A2P52657 AC018445.3-201ENST00000624177 1945 ntBASIC20.41■□□□□ 0.86
GTF2A2P52657 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.41■□□□□ 0.86
GTF2A2P52657 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GTF2A2P52657 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GTF2A2P52657 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A2P52657 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
GTF2A2P52657 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A2P52657 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
GTF2A2P52657 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A2P52657 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.4■□□□□ 0.86
GTF2A2P52657 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.4■□□□□ 0.86
GTF2A2P52657 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.4■□□□□ 0.86
GTF2A2P52657 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.4■□□□□ 0.86
GTF2A2P52657 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A2P52657 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A2P52657 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A2P52657 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A2P52657 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.4■□□□□ 0.86
GTF2A2P52657 AC093512.1-201ENST00000617969 520 ntBASIC20.4■□□□□ 0.86
GTF2A2P52657 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
GTF2A2P52657 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A2P52657 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A2P52657 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.39■□□□□ 0.86
GTF2A2P52657 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.39■□□□□ 0.86
GTF2A2P52657 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
GTF2A2P52657 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GTF2A2P52657 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
GTF2A2P52657 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A2P52657 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A2P52657 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.39■□□□□ 0.85
GTF2A2P52657 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A2P52657 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.39■□□□□ 0.85
GTF2A2P52657 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A2P52657 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A2P52657 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.39■□□□□ 0.85
GTF2A2P52657 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A2P52657 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.39■□□□□ 0.85
GTF2A2P52657 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A2P52657 AC244107.1-201ENST00000442033 332 ntBASIC20.39■□□□□ 0.85
GTF2A2P52657 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.39■□□□□ 0.85
GTF2A2P52657 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.39■□□□□ 0.85
GTF2A2P52657 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.39■□□□□ 0.85
GTF2A2P52657 AC019129.2-201ENST00000609837 1235 ntBASIC20.39■□□□□ 0.85
GTF2A2P52657 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A2P52657 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A2P52657 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A2P52657 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A2P52657 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A2P52657 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
GTF2A2P52657 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GTF2A2P52657 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GTF2A2P52657 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GTF2A2P52657 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
GTF2A2P52657 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
GTF2A2P52657 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GTF2A2P52657 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.38■□□□□ 0.85
GTF2A2P52657 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.38■□□□□ 0.85
GTF2A2P52657 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.38■□□□□ 0.85
GTF2A2P52657 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.38■□□□□ 0.85
GTF2A2P52657 HLA-J-203ENST00000494367 1087 ntBASIC20.38■□□□□ 0.85
GTF2A2P52657 AC025678.2-201ENST00000562061 970 ntBASIC20.38■□□□□ 0.85
GTF2A2P52657 AC105339.1-204ENST00000636249 355 ntBASIC20.38■□□□□ 0.85
GTF2A2P52657 AC092902.6-201ENST00000641783 218 ntBASIC20.38■□□□□ 0.85
GTF2A2P52657 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GTF2A2P52657 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.38■□□□□ 0.85
GTF2A2P52657 PHGDH-209ENST00000641074 1780 ntBASIC20.38■□□□□ 0.85
GTF2A2P52657 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
GTF2A2P52657 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GTF2A2P52657 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
GTF2A2P52657 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
GTF2A2P52657 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GTF2A2P52657 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.37■□□□□ 0.85
GTF2A2P52657 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GTF2A2P52657 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.37■□□□□ 0.85
GTF2A2P52657 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GTF2A2P52657 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GTF2A2P52657 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
GTF2A2P52657 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
GTF2A2P52657 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
GTF2A2P52657 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
GTF2A2P52657 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
GTF2A2P52657 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.37■□□□□ 0.85
GTF2A2P52657 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GTF2A2P52657 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GTF2A2P52657 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms