Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.43■□□□□ 0.7
CASP4P49662 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CASP4P49662 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CASP4P49662 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CASP4P49662 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CASP4P49662 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.42■□□□□ 0.7
CASP4P49662 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.42■□□□□ 0.7
CASP4P49662 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.42■□□□□ 0.7
CASP4P49662 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.42■□□□□ 0.7
CASP4P49662 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASP4P49662 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CASP4P49662 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CASP4P49662 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CASP4P49662 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.42■□□□□ 0.7
CASP4P49662 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASP4P49662 CHCHD2P8-201ENST00000429873 447 ntBASIC19.42■□□□□ 0.7
CASP4P49662 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CASP4P49662 TSSC2-201ENST00000450217 709 ntBASIC19.42■□□□□ 0.7
CASP4P49662 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CASP4P49662 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CASP4P49662 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.42■□□□□ 0.7
CASP4P49662 AC090616.6-201ENST00000582640 721 ntBASIC19.42■□□□□ 0.7
CASP4P49662 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.42■□□□□ 0.7
CASP4P49662 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.42■□□□□ 0.7
CASP4P49662 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CASP4P49662 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CASP4P49662 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASP4P49662 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CASP4P49662 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASP4P49662 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CASP4P49662 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASP4P49662 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASP4P49662 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASP4P49662 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CASP4P49662 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASP4P49662 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CASP4P49662 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CASP4P49662 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASP4P49662 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CASP4P49662 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.41■□□□□ 0.7
CASP4P49662 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASP4P49662 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CASP4P49662 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASP4P49662 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASP4P49662 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASP4P49662 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASP4P49662 DDX43P3-201ENST00000441064 443 ntBASIC19.41■□□□□ 0.7
CASP4P49662 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.41■□□□□ 0.7
CASP4P49662 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.41■□□□□ 0.7
CASP4P49662 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.41■□□□□ 0.7
CASP4P49662 AC005336.2-201ENST00000593183 939 ntBASIC19.41■□□□□ 0.7
CASP4P49662 AC091076.1-201ENST00000610741 619 ntBASIC19.41■□□□□ 0.7
CASP4P49662 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.41■□□□□ 0.7
CASP4P49662 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.41■□□□□ 0.7
CASP4P49662 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASP4P49662 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CASP4P49662 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASP4P49662 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CASP4P49662 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.41■□□□□ 0.7
CASP4P49662 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CASP4P49662 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASP4P49662 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.41■□□□□ 0.7
CASP4P49662 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.41■□□□□ 0.7
CASP4P49662 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CASP4P49662 AC010460.3-201ENST00000511359 1579 ntBASIC19.4■□□□□ 0.7
CASP4P49662 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASP4P49662 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.4■□□□□ 0.7
CASP4P49662 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASP4P49662 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CASP4P49662 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.4■□□□□ 0.7
CASP4P49662 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASP4P49662 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASP4P49662 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASP4P49662 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.4■□□□□ 0.7
CASP4P49662 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASP4P49662 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CASP4P49662 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CASP4P49662 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CASP4P49662 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CASP4P49662 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.4■□□□□ 0.7
CASP4P49662 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASP4P49662 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASP4P49662 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASP4P49662 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.4■□□□□ 0.7
CASP4P49662 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CASP4P49662 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.4■□□□□ 0.7
CASP4P49662 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASP4P49662 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.4■□□□□ 0.7
CASP4P49662 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASP4P49662 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CASP4P49662 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASP4P49662 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.4■□□□□ 0.7
CASP4P49662 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CASP4P49662 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.39■□□□□ 0.7
CASP4P49662 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CASP4P49662 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.39■□□□□ 0.7
CASP4P49662 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms