Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 AC007613.1-201ENST00000572811 2597 ntBASIC20.31■□□□□ 0.84
COPB2P35606 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COPB2P35606 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPB2P35606 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.31■□□□□ 0.84
COPB2P35606 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.31■□□□□ 0.84
COPB2P35606 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.31■□□□□ 0.84
COPB2P35606 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
COPB2P35606 RNA5SP416-201ENST00000516838 111 ntBASIC20.31■□□□□ 0.84
COPB2P35606 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.31■□□□□ 0.84
COPB2P35606 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPB2P35606 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.31■□□□□ 0.84
COPB2P35606 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.31■□□□□ 0.84
COPB2P35606 AL589182.2-201ENST00000619332 1049 ntBASIC20.31■□□□□ 0.84
COPB2P35606 AC073592.5-201ENST00000624854 528 ntBASIC20.31■□□□□ 0.84
COPB2P35606 AC005593.1-201ENST00000624894 515 ntBASIC20.31■□□□□ 0.84
COPB2P35606 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPB2P35606 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
COPB2P35606 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPB2P35606 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPB2P35606 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPB2P35606 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
COPB2P35606 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
COPB2P35606 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
COPB2P35606 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COPB2P35606 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COPB2P35606 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPB2P35606 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPB2P35606 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COPB2P35606 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPB2P35606 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPB2P35606 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPB2P35606 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.3■□□□□ 0.84
COPB2P35606 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.3■□□□□ 0.84
COPB2P35606 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
COPB2P35606 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.3■□□□□ 0.84
COPB2P35606 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.3■□□□□ 0.84
COPB2P35606 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.3■□□□□ 0.84
COPB2P35606 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COPB2P35606 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPB2P35606 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPB2P35606 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPB2P35606 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COPB2P35606 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPB2P35606 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COPB2P35606 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COPB2P35606 CROCCP3-202ENST00000420820 1947 ntBASIC20.29■□□□□ 0.84
COPB2P35606 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPB2P35606 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COPB2P35606 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.29■□□□□ 0.84
COPB2P35606 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPB2P35606 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPB2P35606 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.29■□□□□ 0.84
COPB2P35606 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
COPB2P35606 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPB2P35606 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.29■□□□□ 0.84
COPB2P35606 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.29■□□□□ 0.84
COPB2P35606 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPB2P35606 AL020989.1-201ENST00000422979 469 ntBASIC20.29■□□□□ 0.84
COPB2P35606 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COPB2P35606 DNAJB3-201ENST00000446806 729 ntBASIC20.29■□□□□ 0.84
COPB2P35606 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.29■□□□□ 0.84
COPB2P35606 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.29■□□□□ 0.84
COPB2P35606 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.29■□□□□ 0.84
COPB2P35606 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.29■□□□□ 0.84
COPB2P35606 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.29■□□□□ 0.84
COPB2P35606 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPB2P35606 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPB2P35606 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.29■□□□□ 0.84
COPB2P35606 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPB2P35606 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPB2P35606 AC104581.1-202ENST00000635932 2618 ntBASIC20.29■□□□□ 0.84
COPB2P35606 AL353593.2-201ENST00000602529 1483 ntBASIC20.29■□□□□ 0.84
COPB2P35606 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COPB2P35606 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.29■□□□□ 0.84
COPB2P35606 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.29■□□□□ 0.84
COPB2P35606 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.28■□□□□ 0.84
COPB2P35606 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPB2P35606 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPB2P35606 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.28■□□□□ 0.84
COPB2P35606 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
COPB2P35606 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPB2P35606 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COPB2P35606 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COPB2P35606 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.28■□□□□ 0.84
COPB2P35606 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.28■□□□□ 0.84
COPB2P35606 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.28■□□□□ 0.84
COPB2P35606 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
COPB2P35606 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.28■□□□□ 0.84
COPB2P35606 AC009947.1-201ENST00000444350 727 ntBASIC20.28■□□□□ 0.84
COPB2P35606 AC136632.2-201ENST00000512891 861 ntBASIC20.28■□□□□ 0.84
COPB2P35606 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.28■□□□□ 0.84
COPB2P35606 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
COPB2P35606 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.28■□□□□ 0.84
COPB2P35606 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.28■□□□□ 0.84
COPB2P35606 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COPB2P35606 AC116407.2-201ENST00000613639 860 ntBASIC20.28■□□□□ 0.84
COPB2P35606 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
COPB2P35606 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COPB2P35606 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.28■□□□□ 0.84
COPB2P35606 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms