Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.43■□□□□ 0.22
ABCD3P28288 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
ABCD3P28288 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.42■□□□□ 0.22
ABCD3P28288 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ABCD3P28288 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ABCD3P28288 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
ABCD3P28288 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ABCD3P28288 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ABCD3P28288 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.42■□□□□ 0.22
ABCD3P28288 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ABCD3P28288 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.42■□□□□ 0.22
ABCD3P28288 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ABCD3P28288 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ABCD3P28288 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ABCD3P28288 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ABCD3P28288 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ABCD3P28288 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.42■□□□□ 0.22
ABCD3P28288 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
ABCD3P28288 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ABCD3P28288 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.42■□□□□ 0.22
ABCD3P28288 AC096633.1-201ENST00000422446 749 ntBASIC16.42■□□□□ 0.22
ABCD3P28288 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.42■□□□□ 0.22
ABCD3P28288 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ABCD3P28288 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.42■□□□□ 0.22
ABCD3P28288 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.42■□□□□ 0.22
ABCD3P28288 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.42■□□□□ 0.22
ABCD3P28288 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.42■□□□□ 0.22
ABCD3P28288 AC099336.1-202ENST00000602961 463 ntBASIC16.42■□□□□ 0.22
ABCD3P28288 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.42■□□□□ 0.22
ABCD3P28288 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.42■□□□□ 0.22
ABCD3P28288 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ABCD3P28288 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.42■□□□□ 0.22
ABCD3P28288 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ABCD3P28288 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
ABCD3P28288 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ABCD3P28288 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.42■□□□□ 0.22
ABCD3P28288 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ABCD3P28288 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ABCD3P28288 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ABCD3P28288 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ABCD3P28288 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ABCD3P28288 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ABCD3P28288 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ABCD3P28288 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ABCD3P28288 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ABCD3P28288 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.41■□□□□ 0.22
ABCD3P28288 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.41■□□□□ 0.22
ABCD3P28288 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ABCD3P28288 NUS1P1-201ENST00000446295 882 ntBASIC16.41■□□□□ 0.22
ABCD3P28288 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.41■□□□□ 0.22
ABCD3P28288 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.41■□□□□ 0.22
ABCD3P28288 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.41■□□□□ 0.22
ABCD3P28288 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.41■□□□□ 0.22
ABCD3P28288 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.41■□□□□ 0.22
ABCD3P28288 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ABCD3P28288 AC009533.2-201ENST00000543664 586 ntBASIC16.41■□□□□ 0.22
ABCD3P28288 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.41■□□□□ 0.22
ABCD3P28288 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.41■□□□□ 0.22
ABCD3P28288 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.41■□□□□ 0.22
ABCD3P28288 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.41■□□□□ 0.22
ABCD3P28288 BNIP3P18-201ENST00000593976 575 ntBASIC16.41■□□□□ 0.22
ABCD3P28288 CLEC4GP1-201ENST00000596555 870 ntBASIC16.41■□□□□ 0.22
ABCD3P28288 AC018470.1-201ENST00000624790 3129 ntBASIC16.41■□□□□ 0.22
ABCD3P28288 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ABCD3P28288 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ABCD3P28288 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ABCD3P28288 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ABCD3P28288 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ABCD3P28288 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ABCD3P28288 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.41■□□□□ 0.22
ABCD3P28288 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
ABCD3P28288 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ABCD3P28288 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ABCD3P28288 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.4■□□□□ 0.22
ABCD3P28288 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.4■□□□□ 0.22
ABCD3P28288 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ABCD3P28288 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ABCD3P28288 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
ABCD3P28288 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ABCD3P28288 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ABCD3P28288 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ABCD3P28288 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.4■□□□□ 0.22
ABCD3P28288 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ABCD3P28288 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
ABCD3P28288 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ABCD3P28288 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
ABCD3P28288 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ABCD3P28288 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ABCD3P28288 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ABCD3P28288 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ABCD3P28288 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ABCD3P28288 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.4■□□□□ 0.22
ABCD3P28288 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.4■□□□□ 0.22
ABCD3P28288 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.4■□□□□ 0.22
ABCD3P28288 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.4■□□□□ 0.22
ABCD3P28288 AC096582.2-201ENST00000510860 516 ntBASIC16.4■□□□□ 0.22
ABCD3P28288 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ABCD3P28288 PRELID1P1-202ENST00000567272 903 ntBASIC16.4■□□□□ 0.22
ABCD3P28288 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.4■□□□□ 0.22
ABCD3P28288 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms