Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.67■□□□□ 0.1
ATF1P18846 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.67■□□□□ 0.1
ATF1P18846 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATF1P18846 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
ATF1P18846 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.66■□□□□ 0.1
ATF1P18846 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ATF1P18846 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.66■□□□□ 0.1
ATF1P18846 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ATF1P18846 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.66■□□□□ 0.1
ATF1P18846 MIR1238-201ENST00000408483 83 ntBASIC15.66■□□□□ 0.1
ATF1P18846 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.66■□□□□ 0.1
ATF1P18846 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.66■□□□□ 0.1
ATF1P18846 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
ATF1P18846 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.66■□□□□ 0.1
ATF1P18846 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.66■□□□□ 0.1
ATF1P18846 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
ATF1P18846 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ATF1P18846 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.66■□□□□ 0.1
ATF1P18846 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATF1P18846 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.65■□□□□ 0.1
ATF1P18846 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.65■□□□□ 0.1
ATF1P18846 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.65■□□□□ 0.1
ATF1P18846 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.65■□□□□ 0.1
ATF1P18846 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.65■□□□□ 0.1
ATF1P18846 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.65■□□□□ 0.1
ATF1P18846 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.65■□□□□ 0.1
ATF1P18846 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.65■□□□□ 0.1
ATF1P18846 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.65■□□□□ 0.1
ATF1P18846 AC010653.2-201ENST00000623505 997 ntBASIC15.65■□□□□ 0.1
ATF1P18846 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.65■□□□□ 0.1
ATF1P18846 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 AC106886.4-201ENST00000623557 2502 ntBASIC15.65■□□□□ 0.1
ATF1P18846 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
ATF1P18846 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ATF1P18846 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ATF1P18846 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ATF1P18846 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.65■□□□□ 0.1
ATF1P18846 LINC00304-203ENST00000565008 1864 ntBASIC15.65■□□□□ 0.1
ATF1P18846 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ATF1P18846 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.65■□□□□ 0.1
ATF1P18846 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATF1P18846 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
ATF1P18846 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
ATF1P18846 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATF1P18846 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.64■□□□□ 0.09
ATF1P18846 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATF1P18846 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
ATF1P18846 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATF1P18846 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATF1P18846 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATF1P18846 PCDHB19P-201ENST00000570871 2371 ntBASIC15.64■□□□□ 0.09
ATF1P18846 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATF1P18846 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATF1P18846 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATF1P18846 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ATF1P18846 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATF1P18846 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATF1P18846 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms