Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
VCLP18206 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.95■□□□□ 0.46
VCLP18206 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.94■□□□□ 0.46
VCLP18206 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VCLP18206 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCLP18206 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VCLP18206 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCLP18206 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
VCLP18206 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCLP18206 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VCLP18206 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.94■□□□□ 0.46
VCLP18206 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCLP18206 BX276092.5-203ENST00000456199 560 ntBASIC17.94■□□□□ 0.46
VCLP18206 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VCLP18206 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.94■□□□□ 0.46
VCLP18206 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.94■□□□□ 0.46
VCLP18206 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.94■□□□□ 0.46
VCLP18206 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.94■□□□□ 0.46
VCLP18206 AL121672.3-201ENST00000608644 468 ntBASIC17.94■□□□□ 0.46
VCLP18206 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCLP18206 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
VCLP18206 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VCLP18206 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCLP18206 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.94■□□□□ 0.46
VCLP18206 GNAS-203ENST00000306120 1878 ntBASIC17.94■□□□□ 0.46
VCLP18206 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCLP18206 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VCLP18206 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.94■□□□□ 0.46
VCLP18206 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
VCLP18206 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.93■□□□□ 0.46
VCLP18206 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.93■□□□□ 0.46
VCLP18206 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.93■□□□□ 0.46
VCLP18206 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
VCLP18206 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
VCLP18206 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
VCLP18206 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.93■□□□□ 0.46
VCLP18206 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.93■□□□□ 0.46
VCLP18206 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.93■□□□□ 0.46
VCLP18206 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.93■□□□□ 0.46
VCLP18206 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.93■□□□□ 0.46
VCLP18206 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.93■□□□□ 0.46
VCLP18206 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.93■□□□□ 0.46
VCLP18206 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
VCLP18206 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
VCLP18206 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.93■□□□□ 0.46
VCLP18206 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
VCLP18206 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.93■□□□□ 0.46
VCLP18206 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
VCLP18206 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VCLP18206 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VCLP18206 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCLP18206 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.92■□□□□ 0.46
VCLP18206 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.92■□□□□ 0.46
VCLP18206 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.92■□□□□ 0.46
VCLP18206 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCLP18206 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.92■□□□□ 0.46
VCLP18206 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.92■□□□□ 0.46
VCLP18206 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCLP18206 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
VCLP18206 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.92■□□□□ 0.46
VCLP18206 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VCLP18206 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
VCLP18206 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCLP18206 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.92■□□□□ 0.46
VCLP18206 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VCLP18206 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.92■□□□□ 0.46
VCLP18206 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.92■□□□□ 0.46
VCLP18206 GPR32P1-201ENST00000601788 811 ntBASIC17.92■□□□□ 0.46
VCLP18206 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VCLP18206 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VCLP18206 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
VCLP18206 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VCLP18206 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VCLP18206 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.92■□□□□ 0.46
VCLP18206 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.92■□□□□ 0.46
VCLP18206 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VCLP18206 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
VCLP18206 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
VCLP18206 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms