Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HOXB3P14651 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXB3P14651 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
HOXB3P14651 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXB3P14651 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
HOXB3P14651 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXB3P14651 POM121L3P-201ENST00000419331 1163 ntBASIC17.45■□□□□ 0.38
HOXB3P14651 AF186996.4-201ENST00000467186 377 ntBASIC17.45■□□□□ 0.38
HOXB3P14651 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.45■□□□□ 0.38
HOXB3P14651 AC068472.1-201ENST00000474589 881 ntBASIC17.45■□□□□ 0.38
HOXB3P14651 AC008687.5-201ENST00000593746 558 ntBASIC17.45■□□□□ 0.38
HOXB3P14651 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXB3P14651 AL596442.2-201ENST00000610240 980 ntBASIC17.45■□□□□ 0.38
HOXB3P14651 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXB3P14651 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXB3P14651 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HOXB3P14651 AC093677.2-201ENST00000600169 1863 ntBASIC17.45■□□□□ 0.38
HOXB3P14651 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXB3P14651 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXB3P14651 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXB3P14651 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXB3P14651 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HOXB3P14651 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXB3P14651 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXB3P14651 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXB3P14651 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXB3P14651 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXB3P14651 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXB3P14651 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXB3P14651 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXB3P14651 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXB3P14651 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXB3P14651 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXB3P14651 MIR770-201ENST00000390219 98 ntBASIC17.44■□□□□ 0.38
HOXB3P14651 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXB3P14651 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.44■□□□□ 0.38
HOXB3P14651 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXB3P14651 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.44■□□□□ 0.38
HOXB3P14651 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.44■□□□□ 0.38
HOXB3P14651 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
HOXB3P14651 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HOXB3P14651 MIR5100-201ENST00000579544 119 ntBASIC17.44■□□□□ 0.38
HOXB3P14651 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.44■□□□□ 0.38
HOXB3P14651 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.44■□□□□ 0.38
HOXB3P14651 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXB3P14651 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXB3P14651 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HOXB3P14651 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
HOXB3P14651 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXB3P14651 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXB3P14651 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HOXB3P14651 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXB3P14651 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HOXB3P14651 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXB3P14651 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXB3P14651 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXB3P14651 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
HOXB3P14651 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HOXB3P14651 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.43■□□□□ 0.38
HOXB3P14651 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXB3P14651 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXB3P14651 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXB3P14651 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXB3P14651 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXB3P14651 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.43■□□□□ 0.38
HOXB3P14651 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXB3P14651 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXB3P14651 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXB3P14651 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXB3P14651 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXB3P14651 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HOXB3P14651 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXB3P14651 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HOXB3P14651 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXB3P14651 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXB3P14651 EIF2S2P3-201ENST00000428356 999 ntBASIC17.43■□□□□ 0.38
HOXB3P14651 HLA-V-201ENST00000429037 534 ntBASIC17.43■□□□□ 0.38
HOXB3P14651 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
HOXB3P14651 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC17.43■□□□□ 0.38
HOXB3P14651 AC096582.2-201ENST00000510860 516 ntBASIC17.43■□□□□ 0.38
HOXB3P14651 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.43■□□□□ 0.38
HOXB3P14651 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.43■□□□□ 0.38
HOXB3P14651 AL591684.3-201ENST00000605187 298 ntBASIC17.43■□□□□ 0.38
HOXB3P14651 AL451064.1-201ENST00000607718 471 ntBASIC17.43■□□□□ 0.38
HOXB3P14651 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXB3P14651 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXB3P14651 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXB3P14651 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXB3P14651 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXB3P14651 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXB3P14651 LINC00602-201ENST00000629776 2065 ntBASIC17.43■□□□□ 0.38
HOXB3P14651 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HOXB3P14651 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXB3P14651 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXB3P14651 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXB3P14651 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXB3P14651 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.42■□□□□ 0.38
HOXB3P14651 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HOXB3P14651 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXB3P14651 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms