Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CLTAP09496 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLTAP09496 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.5■□□□□ 0.71
CLTAP09496 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLTAP09496 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.49■□□□□ 0.71
CLTAP09496 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLTAP09496 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CLTAP09496 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLTAP09496 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CLTAP09496 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLTAP09496 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CLTAP09496 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLTAP09496 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLTAP09496 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CLTAP09496 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.49■□□□□ 0.71
CLTAP09496 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.49■□□□□ 0.71
CLTAP09496 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.49■□□□□ 0.71
CLTAP09496 AC099336.1-202ENST00000602961 463 ntBASIC19.49■□□□□ 0.71
CLTAP09496 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.49■□□□□ 0.71
CLTAP09496 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CLTAP09496 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CLTAP09496 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CLTAP09496 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLTAP09496 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CLTAP09496 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLTAP09496 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLTAP09496 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLTAP09496 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CLTAP09496 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLTAP09496 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLTAP09496 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLTAP09496 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CLTAP09496 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLTAP09496 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLTAP09496 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLTAP09496 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLTAP09496 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLTAP09496 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.48■□□□□ 0.71
CLTAP09496 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.48■□□□□ 0.71
CLTAP09496 FOSL1P1-201ENST00000511041 816 ntBASIC19.48■□□□□ 0.71
CLTAP09496 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.48■□□□□ 0.71
CLTAP09496 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.48■□□□□ 0.71
CLTAP09496 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLTAP09496 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.48■□□□□ 0.71
CLTAP09496 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLTAP09496 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.48■□□□□ 0.71
CLTAP09496 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLTAP09496 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLTAP09496 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLTAP09496 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CLTAP09496 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLTAP09496 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.47■□□□□ 0.71
CLTAP09496 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.47■□□□□ 0.71
CLTAP09496 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 AC012313.1-201ENST00000593393 3059 ntBASIC19.47■□□□□ 0.71
CLTAP09496 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.47■□□□□ 0.71
CLTAP09496 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CLTAP09496 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 AL450487.1-201ENST00000426799 995 ntBASIC19.47■□□□□ 0.71
CLTAP09496 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.47■□□□□ 0.71
CLTAP09496 AL121772.3-201ENST00000610840 674 ntBASIC19.47■□□□□ 0.71
CLTAP09496 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CLTAP09496 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLTAP09496 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.47■□□□□ 0.71
CLTAP09496 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.47■□□□□ 0.71
CLTAP09496 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.47■□□□□ 0.71
CLTAP09496 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLTAP09496 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLTAP09496 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLTAP09496 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CLTAP09496 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.46■□□□□ 0.71
CLTAP09496 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLTAP09496 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CLTAP09496 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLTAP09496 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLTAP09496 AC125634.1-201ENST00000438758 1403 ntBASIC19.46■□□□□ 0.71
CLTAP09496 NOC2LP1-202ENST00000452600 2235 ntBASIC19.46■□□□□ 0.71
CLTAP09496 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CLTAP09496 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLTAP09496 TSPY19P-201ENST00000418461 509 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms