Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3O95983 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3O95983 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3O95983 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.44■□□□□ 0.86
MBD3O95983 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3O95983 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3O95983 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3O95983 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.44■□□□□ 0.86
MBD3O95983 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3O95983 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.44■□□□□ 0.86
MBD3O95983 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3O95983 WWOX-216ENST00000569818 525 ntBASIC20.44■□□□□ 0.86
MBD3O95983 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3O95983 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3O95983 AC046158.3-201ENST00000624947 2558 ntBASIC20.44■□□□□ 0.86
MBD3O95983 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3O95983 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3O95983 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.44■□□□□ 0.86
MBD3O95983 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
MBD3O95983 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3O95983 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
MBD3O95983 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
MBD3O95983 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.43■□□□□ 0.86
MBD3O95983 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MBD3O95983 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MBD3O95983 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
MBD3O95983 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MBD3O95983 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
MBD3O95983 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MBD3O95983 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MBD3O95983 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.43■□□□□ 0.86
MBD3O95983 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.43■□□□□ 0.86
MBD3O95983 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MBD3O95983 DDX43P3-201ENST00000441064 443 ntBASIC20.43■□□□□ 0.86
MBD3O95983 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.43■□□□□ 0.86
MBD3O95983 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.43■□□□□ 0.86
MBD3O95983 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.43■□□□□ 0.86
MBD3O95983 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.43■□□□□ 0.86
MBD3O95983 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
MBD3O95983 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
MBD3O95983 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.43■□□□□ 0.86
MBD3O95983 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MBD3O95983 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
MBD3O95983 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.43■□□□□ 0.86
MBD3O95983 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MBD3O95983 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
MBD3O95983 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
MBD3O95983 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
MBD3O95983 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.42■□□□□ 0.86
MBD3O95983 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
MBD3O95983 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.42■□□□□ 0.86
MBD3O95983 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
MBD3O95983 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
MBD3O95983 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MBD3O95983 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MBD3O95983 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MBD3O95983 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
MBD3O95983 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.42■□□□□ 0.86
MBD3O95983 AC008687.5-201ENST00000593746 558 ntBASIC20.42■□□□□ 0.86
MBD3O95983 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.42■□□□□ 0.86
MBD3O95983 LINC00167-201ENST00000530583 1419 ntBASIC20.42■□□□□ 0.86
MBD3O95983 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.42■□□□□ 0.86
MBD3O95983 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MBD3O95983 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
MBD3O95983 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
MBD3O95983 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
MBD3O95983 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
MBD3O95983 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MBD3O95983 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.42■□□□□ 0.86
MBD3O95983 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
MBD3O95983 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MBD3O95983 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MBD3O95983 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MBD3O95983 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MBD3O95983 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.41■□□□□ 0.86
MBD3O95983 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MBD3O95983 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.41■□□□□ 0.86
MBD3O95983 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MBD3O95983 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.41■□□□□ 0.86
MBD3O95983 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MBD3O95983 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.41■□□□□ 0.86
MBD3O95983 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
MBD3O95983 CR769767.2-201ENST00000622735 460 ntBASIC20.41■□□□□ 0.86
MBD3O95983 AC112497.1-201ENST00000624824 639 ntBASIC20.41■□□□□ 0.86
MBD3O95983 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
MBD3O95983 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
MBD3O95983 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
MBD3O95983 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MBD3O95983 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MBD3O95983 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MBD3O95983 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MBD3O95983 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.41■□□□□ 0.86
MBD3O95983 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MBD3O95983 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.41■□□□□ 0.86
MBD3O95983 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
MBD3O95983 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MBD3O95983 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MBD3O95983 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MBD3O95983 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.41■□□□□ 0.86
MBD3O95983 DOC2GP-204ENST00000639052 2548 ntBASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms