Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCN1O60741 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HCN1O60741 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCN1O60741 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCN1O60741 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCN1O60741 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCN1O60741 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.68■□□□□ 0.26
HCN1O60741 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HCN1O60741 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCN1O60741 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCN1O60741 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HCN1O60741 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCN1O60741 KRT18P48-201ENST00000434763 852 ntBASIC16.68■□□□□ 0.26
HCN1O60741 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCN1O60741 KRT8P26-201ENST00000534154 1276 ntBASIC16.68■□□□□ 0.26
HCN1O60741 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.68■□□□□ 0.26
HCN1O60741 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.68■□□□□ 0.26
HCN1O60741 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.68■□□□□ 0.26
HCN1O60741 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.68■□□□□ 0.26
HCN1O60741 FLJ13224-201ENST00000313737 1514 ntBASIC16.68■□□□□ 0.26
HCN1O60741 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCN1O60741 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCN1O60741 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HCN1O60741 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCN1O60741 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCN1O60741 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCN1O60741 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.68■□□□□ 0.26
HCN1O60741 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.68■□□□□ 0.26
HCN1O60741 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HCN1O60741 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HCN1O60741 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCN1O60741 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCN1O60741 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCN1O60741 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HCN1O60741 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HCN1O60741 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
HCN1O60741 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.67■□□□□ 0.26
HCN1O60741 GNAS-203ENST00000306120 1878 ntBASIC16.67■□□□□ 0.26
HCN1O60741 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.67■□□□□ 0.26
HCN1O60741 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.67■□□□□ 0.26
HCN1O60741 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HCN1O60741 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.67■□□□□ 0.26
HCN1O60741 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.67■□□□□ 0.26
HCN1O60741 TSSC2-201ENST00000450217 709 ntBASIC16.67■□□□□ 0.26
HCN1O60741 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.67■□□□□ 0.26
HCN1O60741 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.67■□□□□ 0.26
HCN1O60741 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.67■□□□□ 0.26
HCN1O60741 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.67■□□□□ 0.26
HCN1O60741 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.67■□□□□ 0.26
HCN1O60741 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.67■□□□□ 0.26
HCN1O60741 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.67■□□□□ 0.26
HCN1O60741 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 KRT8P50-201ENST00000562022 1438 ntBASIC16.67■□□□□ 0.26
HCN1O60741 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HCN1O60741 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.67■□□□□ 0.26
HCN1O60741 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
HCN1O60741 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCN1O60741 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.67■□□□□ 0.26
HCN1O60741 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HCN1O60741 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.66■□□□□ 0.26
HCN1O60741 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HCN1O60741 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.66■□□□□ 0.26
HCN1O60741 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HCN1O60741 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HCN1O60741 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HCN1O60741 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HCN1O60741 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HCN1O60741 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HCN1O60741 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HCN1O60741 LINC00896-202ENST00000609602 2128 ntBASIC16.66■□□□□ 0.26
HCN1O60741 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
HCN1O60741 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.66■□□□□ 0.26
HCN1O60741 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HCN1O60741 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.66■□□□□ 0.26
HCN1O60741 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.66■□□□□ 0.26
HCN1O60741 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HCN1O60741 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HCN1O60741 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.66■□□□□ 0.26
HCN1O60741 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.66■□□□□ 0.26
HCN1O60741 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.66■□□□□ 0.26
HCN1O60741 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HCN1O60741 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HCN1O60741 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms