Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.57■□□□□ 0.4
SNX3O60493 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SNX3O60493 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.57■□□□□ 0.4
SNX3O60493 AC073111.5-205ENST00000641717 521 ntBASIC17.57■□□□□ 0.4
SNX3O60493 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.57■□□□□ 0.4
SNX3O60493 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
SNX3O60493 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX3O60493 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX3O60493 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNX3O60493 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX3O60493 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNX3O60493 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX3O60493 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX3O60493 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX3O60493 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX3O60493 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SNX3O60493 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SNX3O60493 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.56■□□□□ 0.4
SNX3O60493 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.56■□□□□ 0.4
SNX3O60493 AC008040.2-201ENST00000461049 708 ntBASIC17.56■□□□□ 0.4
SNX3O60493 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX3O60493 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.56■□□□□ 0.4
SNX3O60493 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.56■□□□□ 0.4
SNX3O60493 CYP2T1P-202ENST00000641596 2535 ntBASIC17.56■□□□□ 0.4
SNX3O60493 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.56■□□□□ 0.4
SNX3O60493 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.56■□□□□ 0.4
SNX3O60493 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX3O60493 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX3O60493 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 AC092068.3-201ENST00000587894 2016 ntBASIC17.55■□□□□ 0.4
SNX3O60493 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.55■□□□□ 0.4
SNX3O60493 AC022188.1-201ENST00000620960 1664 ntBASIC17.55■□□□□ 0.4
SNX3O60493 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 AL356309.3-201ENST00000624132 1934 ntBASIC17.55■□□□□ 0.4
SNX3O60493 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX3O60493 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.55■□□□□ 0.4
SNX3O60493 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
SNX3O60493 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SNX3O60493 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX3O60493 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX3O60493 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.55■□□□□ 0.4
SNX3O60493 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SNX3O60493 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SNX3O60493 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SNX3O60493 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX3O60493 AC132872.4-202ENST00000622924 2756 ntBASIC17.54■□□□□ 0.4
SNX3O60493 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SNX3O60493 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX3O60493 AC022898.2-201ENST00000616822 1312 ntBASIC17.54■□□□□ 0.4
SNX3O60493 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX3O60493 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX3O60493 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX3O60493 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SNX3O60493 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNX3O60493 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX3O60493 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX3O60493 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX3O60493 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.54■□□□□ 0.4
SNX3O60493 AC083906.2-201ENST00000511578 360 ntBASIC17.54■□□□□ 0.4
SNX3O60493 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SNX3O60493 MIR4758-201ENST00000577688 71 ntBASIC17.54■□□□□ 0.4
SNX3O60493 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX3O60493 AC083880.1-201ENST00000608266 535 ntBASIC17.54■□□□□ 0.4
SNX3O60493 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms