Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA2O43364 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA2O43364 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.98■□□□□ 0.63
HOXA2O43364 AC004967.1-201ENST00000453589 447 ntBASIC18.98■□□□□ 0.63
HOXA2O43364 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.98■□□□□ 0.63
HOXA2O43364 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXA2O43364 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
HOXA2O43364 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA2O43364 AC019129.2-201ENST00000609837 1235 ntBASIC18.98■□□□□ 0.63
HOXA2O43364 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXA2O43364 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXA2O43364 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HOXA2O43364 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXA2O43364 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXA2O43364 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXA2O43364 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA2O43364 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA2O43364 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXA2O43364 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA2O43364 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA2O43364 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA2O43364 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA2O43364 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.97■□□□□ 0.63
HOXA2O43364 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.97■□□□□ 0.63
HOXA2O43364 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.97■□□□□ 0.63
HOXA2O43364 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA2O43364 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA2O43364 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HOXA2O43364 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA2O43364 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA2O43364 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA2O43364 AC023274.1-201ENST00000418278 595 ntBASIC18.97■□□□□ 0.63
HOXA2O43364 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HOXA2O43364 AC109462.3-201ENST00000573934 613 ntBASIC18.97■□□□□ 0.63
HOXA2O43364 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.97■□□□□ 0.63
HOXA2O43364 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXA2O43364 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.97■□□□□ 0.63
HOXA2O43364 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA2O43364 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA2O43364 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA2O43364 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA2O43364 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
HOXA2O43364 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXA2O43364 AC006504.4-201ENST00000592118 1568 ntBASIC18.97■□□□□ 0.63
HOXA2O43364 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA2O43364 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXA2O43364 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA2O43364 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA2O43364 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA2O43364 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXA2O43364 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HOXA2O43364 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA2O43364 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HOXA2O43364 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.96■□□□□ 0.63
HOXA2O43364 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA2O43364 AC002310.6-201ENST00000624451 1377 ntBASIC18.96■□□□□ 0.63
HOXA2O43364 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA2O43364 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA2O43364 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.96■□□□□ 0.63
HOXA2O43364 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA2O43364 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXA2O43364 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA2O43364 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HOXA2O43364 PRSS29P-201ENST00000440800 595 ntBASIC18.96■□□□□ 0.63
HOXA2O43364 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA2O43364 STK19B-204ENST00000512515 211 ntBASIC18.96■□□□□ 0.63
HOXA2O43364 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXA2O43364 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.96■□□□□ 0.63
HOXA2O43364 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.96■□□□□ 0.63
HOXA2O43364 STK25P1-201ENST00000585406 838 ntBASIC18.96■□□□□ 0.63
HOXA2O43364 AP001160.2-201ENST00000596071 487 ntBASIC18.96■□□□□ 0.63
HOXA2O43364 AC008667.4-201ENST00000607370 168 ntBASIC18.96■□□□□ 0.63
HOXA2O43364 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.96■□□□□ 0.63
HOXA2O43364 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA2O43364 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA2O43364 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA2O43364 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA2O43364 AC093677.2-201ENST00000600169 1863 ntBASIC18.96■□□□□ 0.63
HOXA2O43364 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA2O43364 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HOXA2O43364 AC148477.5-201ENST00000625164 1645 ntBASIC18.96■□□□□ 0.63
HOXA2O43364 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HOXA2O43364 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA2O43364 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.96■□□□□ 0.63
HOXA2O43364 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HOXA2O43364 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA2O43364 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA2O43364 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA2O43364 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.95■□□□□ 0.62
HOXA2O43364 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA2O43364 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.95■□□□□ 0.62
HOXA2O43364 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA2O43364 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA2O43364 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HOXA2O43364 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA2O43364 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA2O43364 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA2O43364 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.95■□□□□ 0.62
HOXA2O43364 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA2O43364 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms