Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 NEFHP1-201ENST00000412845 2629 ntBASIC16.25■□□□□ 0.19
NPIPA2E9PIF3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.25■□□□□ 0.19
NPIPA2E9PIF3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPA2E9PIF3 ABALON-201ENST00000629058 1903 ntBASIC16.25■□□□□ 0.19
NPIPA2E9PIF3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.25■□□□□ 0.19
NPIPA2E9PIF3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPA2E9PIF3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPA2E9PIF3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NPIPA2E9PIF3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NPIPA2E9PIF3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPIPA2E9PIF3 AC135050.7-201ENST00000624508 2218 ntBASIC16.25■□□□□ 0.19
NPIPA2E9PIF3 AC093677.2-201ENST00000600169 1863 ntBASIC16.25■□□□□ 0.19
NPIPA2E9PIF3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.25■□□□□ 0.19
NPIPA2E9PIF3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 AF238378.1-201ENST00000526806 358 ntBASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPA2E9PIF3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 PHGDH-209ENST00000641074 1780 ntBASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 MTCL1P1-201ENST00000446207 792 ntBASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 AC009154.2-201ENST00000621177 724 ntBASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPA2E9PIF3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 MRPL3P1-201ENST00000400109 1033 ntBASIC16.22■□□□□ 0.19
NPIPA2E9PIF3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms