Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01546A6NGU7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 FAM207BP-201ENST00000447172 505 ntBASIC12.57□□□□□ -0.4
LINC01546A6NGU7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 AC008040.2-201ENST00000461049 708 ntBASIC12.57□□□□□ -0.4
LINC01546A6NGU7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 MIR6821-201ENST00000617625 74 ntBASIC12.57□□□□□ -0.4
LINC01546A6NGU7 AC130371.2-201ENST00000619443 611 ntBASIC12.57□□□□□ -0.4
LINC01546A6NGU7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01546A6NGU7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 AC005052.1-201ENST00000625181 2492 ntBASIC12.56□□□□□ -0.4
LINC01546A6NGU7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 PPP1R14BP2-201ENST00000426284 444 ntBASIC12.56□□□□□ -0.4
LINC01546A6NGU7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 AC124947.2-201ENST00000547118 1133 ntBASIC12.56□□□□□ -0.4
LINC01546A6NGU7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.56□□□□□ -0.4
LINC01546A6NGU7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01546A6NGU7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms