Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RCCD1A6NED2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RCCD1A6NED2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RCCD1A6NED2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.95■□□□□ 0.62
RCCD1A6NED2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.95■□□□□ 0.62
RCCD1A6NED2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.95■□□□□ 0.62
RCCD1A6NED2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RCCD1A6NED2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RCCD1A6NED2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RCCD1A6NED2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RCCD1A6NED2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RCCD1A6NED2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RCCD1A6NED2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.95■□□□□ 0.62
RCCD1A6NED2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.95■□□□□ 0.62
RCCD1A6NED2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.95■□□□□ 0.62
RCCD1A6NED2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.95■□□□□ 0.62
RCCD1A6NED2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.95■□□□□ 0.62
RCCD1A6NED2 AC244517.3-201ENST00000616254 1235 ntBASIC18.95■□□□□ 0.62
RCCD1A6NED2 AL589935.2-201ENST00000616471 1231 ntBASIC18.95■□□□□ 0.62
RCCD1A6NED2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RCCD1A6NED2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RCCD1A6NED2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RCCD1A6NED2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RCCD1A6NED2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RCCD1A6NED2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.95■□□□□ 0.62
RCCD1A6NED2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RCCD1A6NED2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RCCD1A6NED2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RCCD1A6NED2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RCCD1A6NED2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RCCD1A6NED2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.94■□□□□ 0.62
RCCD1A6NED2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.94■□□□□ 0.62
RCCD1A6NED2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.94■□□□□ 0.62
RCCD1A6NED2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.94■□□□□ 0.62
RCCD1A6NED2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RCCD1A6NED2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.94■□□□□ 0.62
RCCD1A6NED2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.94■□□□□ 0.62
RCCD1A6NED2 DDX43P3-201ENST00000441064 443 ntBASIC18.94■□□□□ 0.62
RCCD1A6NED2 AC113404.2-201ENST00000507884 177 ntBASIC18.94■□□□□ 0.62
RCCD1A6NED2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.94■□□□□ 0.62
RCCD1A6NED2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.62
RCCD1A6NED2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.94■□□□□ 0.62
RCCD1A6NED2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RCCD1A6NED2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
RCCD1A6NED2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 LYSMD4-203ENST00000378904 2122 ntBASIC18.94■□□□□ 0.62
RCCD1A6NED2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RCCD1A6NED2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RCCD1A6NED2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RCCD1A6NED2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RCCD1A6NED2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RCCD1A6NED2 AC105020.1-201ENST00000435356 2205 ntBASIC18.93■□□□□ 0.62
RCCD1A6NED2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RCCD1A6NED2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RCCD1A6NED2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.93■□□□□ 0.62
RCCD1A6NED2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RCCD1A6NED2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RCCD1A6NED2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
RCCD1A6NED2 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.93■□□□□ 0.62
RCCD1A6NED2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.93■□□□□ 0.62
RCCD1A6NED2 ECEL1P2-202ENST00000465689 757 ntBASIC18.93■□□□□ 0.62
RCCD1A6NED2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RCCD1A6NED2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.93■□□□□ 0.62
RCCD1A6NED2 AC092865.7-201ENST00000641832 219 ntBASIC18.93■□□□□ 0.62
RCCD1A6NED2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RCCD1A6NED2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
RCCD1A6NED2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RCCD1A6NED2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RCCD1A6NED2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RCCD1A6NED2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RCCD1A6NED2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RCCD1A6NED2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.92■□□□□ 0.62
RCCD1A6NED2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RCCD1A6NED2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RCCD1A6NED2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RCCD1A6NED2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RCCD1A6NED2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RCCD1A6NED2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RCCD1A6NED2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
RCCD1A6NED2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RCCD1A6NED2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms