Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
HFM1A2PYH4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC26.23■■□□□ 1.79
HFM1A2PYH4 AC008735.5-201ENST00000623544 497 ntBASIC26.23■■□□□ 1.79
HFM1A2PYH4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
HFM1A2PYH4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
HFM1A2PYH4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
HFM1A2PYH4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
HFM1A2PYH4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
HFM1A2PYH4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
HFM1A2PYH4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HFM1A2PYH4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
HFM1A2PYH4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC26.23■■□□□ 1.79
HFM1A2PYH4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HFM1A2PYH4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC26.22■■□□□ 1.79
HFM1A2PYH4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HFM1A2PYH4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC26.22■■□□□ 1.79
HFM1A2PYH4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HFM1A2PYH4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HFM1A2PYH4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HFM1A2PYH4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HFM1A2PYH4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
HFM1A2PYH4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC26.22■■□□□ 1.79
HFM1A2PYH4 AC004817.3-201ENST00000602957 2129 ntBASIC26.22■■□□□ 1.79
HFM1A2PYH4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC26.22■■□□□ 1.79
HFM1A2PYH4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HFM1A2PYH4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.22■■□□□ 1.79
HFM1A2PYH4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
HFM1A2PYH4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
HFM1A2PYH4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HFM1A2PYH4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC26.22■■□□□ 1.79
HFM1A2PYH4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC26.22■■□□□ 1.79
HFM1A2PYH4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HFM1A2PYH4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC26.21■■□□□ 1.79
HFM1A2PYH4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
HFM1A2PYH4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC26.21■■□□□ 1.79
HFM1A2PYH4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
HFM1A2PYH4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
HFM1A2PYH4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC26.21■■□□□ 1.79
HFM1A2PYH4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
HFM1A2PYH4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
HFM1A2PYH4 MYCLP1-201ENST00000372451 1075 ntBASIC26.21■■□□□ 1.79
HFM1A2PYH4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC26.21■■□□□ 1.79
HFM1A2PYH4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
HFM1A2PYH4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC26.21■■□□□ 1.79
HFM1A2PYH4 AL671883.3-201ENST00000603274 991 ntBASIC26.21■■□□□ 1.79
HFM1A2PYH4 BX640515.1-201ENST00000617215 977 ntBASIC26.21■■□□□ 1.79
HFM1A2PYH4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC26.21■■□□□ 1.79
HFM1A2PYH4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
HFM1A2PYH4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC26.2■■□□□ 1.79
HFM1A2PYH4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC26.2■■□□□ 1.79
HFM1A2PYH4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC26.2■■□□□ 1.79
HFM1A2PYH4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
HFM1A2PYH4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
HFM1A2PYH4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
HFM1A2PYH4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
HFM1A2PYH4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
HFM1A2PYH4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC26.2■■□□□ 1.78
HFM1A2PYH4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
HFM1A2PYH4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
HFM1A2PYH4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC26.2■■□□□ 1.78
HFM1A2PYH4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
HFM1A2PYH4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC26.2■■□□□ 1.78
HFM1A2PYH4 IGHV3-22-201ENST00000520721 359 ntBASIC26.2■■□□□ 1.78
HFM1A2PYH4 OR7E14P-202ENST00000530490 1290 ntBASIC26.2■■□□□ 1.78
HFM1A2PYH4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC26.2■■□□□ 1.78
HFM1A2PYH4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC26.2■■□□□ 1.78
HFM1A2PYH4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC26.2■■□□□ 1.78
HFM1A2PYH4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
HFM1A2PYH4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
HFM1A2PYH4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
HFM1A2PYH4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
HFM1A2PYH4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
HFM1A2PYH4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
HFM1A2PYH4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HFM1A2PYH4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
HFM1A2PYH4 AC012317.2-201ENST00000623305 2251 ntBASIC26.19■■□□□ 1.78
HFM1A2PYH4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
HFM1A2PYH4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC26.19■■□□□ 1.78
HFM1A2PYH4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC26.19■■□□□ 1.78
HFM1A2PYH4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC26.19■■□□□ 1.78
HFM1A2PYH4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC26.19■■□□□ 1.78
HFM1A2PYH4 SLC25A1P1-201ENST00000528351 927 ntBASIC26.19■■□□□ 1.78
HFM1A2PYH4 AC139887.3-201ENST00000568585 713 ntBASIC26.19■■□□□ 1.78
HFM1A2PYH4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC26.19■■□□□ 1.78
HFM1A2PYH4 AC120114.3-201ENST00000611923 658 ntBASIC26.19■■□□□ 1.78
HFM1A2PYH4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC26.19■■□□□ 1.78
HFM1A2PYH4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
HFM1A2PYH4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
HFM1A2PYH4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
HFM1A2PYH4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC26.19■■□□□ 1.78
HFM1A2PYH4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HFM1A2PYH4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC26.18■■□□□ 1.78
HFM1A2PYH4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC26.18■■□□□ 1.78
HFM1A2PYH4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
HFM1A2PYH4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
HFM1A2PYH4 IL9RP2-201ENST00000423948 1312 ntBASIC26.18■■□□□ 1.78
HFM1A2PYH4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
HFM1A2PYH4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
HFM1A2PYH4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
HFM1A2PYH4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms