Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 CA15P1-201ENST00000481698 905 ntBASIC15.54■□□□□ 0.08
SHISA3A0PJX4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 AC104390.1-201ENST00000555663 520 ntBASIC15.54■□□□□ 0.08
SHISA3A0PJX4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHISA3A0PJX4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 AC022898.2-201ENST00000616822 1312 ntBASIC15.53■□□□□ 0.08
SHISA3A0PJX4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 AC046185.3-201ENST00000623228 1824 ntBASIC15.53■□□□□ 0.08
SHISA3A0PJX4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 SLC25A1P4-201ENST00000567977 778 ntBASIC15.53■□□□□ 0.08
SHISA3A0PJX4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 CR769767.2-201ENST00000622735 460 ntBASIC15.53■□□□□ 0.08
SHISA3A0PJX4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.53■□□□□ 0.08
SHISA3A0PJX4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 AC079328.2-201ENST00000561241 3354 ntBASIC15.52■□□□□ 0.08
SHISA3A0PJX4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 LYSMD4-203ENST00000378904 2122 ntBASIC15.52■□□□□ 0.08
SHISA3A0PJX4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHISA3A0PJX4 PCDHB17P-201ENST00000539533 2393 ntBASIC15.52■□□□□ 0.08
SHISA3A0PJX4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms