Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PVRIG2P-201ENST00000435460 978 ntBASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 DUSP5P1-201ENST00000441325 1139 ntBASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 NPAP1P7-201ENST00000613027 823 ntBASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV4S1A1TA0A5B7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PHGDH-209ENST00000641074 1780 ntBASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 KRT8P50-201ENST00000562022 1438 ntBASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CHCHD2P8-201ENST00000429873 447 ntBASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AP002414.4-201ENST00000589764 1148 ntBASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms