Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX49Q9Y6V7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 AC008556.1-201ENST00000610908 2040 ntBASIC21.45■■□□□ 1.02
DDX49Q9Y6V7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 HCG4P8-203ENST00000443049 980 ntBASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX49Q9Y6V7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 TNRC18P3-201ENST00000441896 2691 ntBASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 PP12613-201ENST00000424958 2230 ntBASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 HBZP1-201ENST00000354915 429 ntBASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 RASA4DP-201ENST00000460726 1199 ntBASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 FLJ13224-201ENST00000313737 1514 ntBASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
DDX49Q9Y6V7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 CLEC4GP1-201ENST00000596555 870 ntBASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.42■■□□□ 1.02
DDX49Q9Y6V7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms