Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB9Q9Y5E1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 AC138028.4-201ENST00000564984 1845 ntBASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 MTCL1P1-201ENST00000446207 792 ntBASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 SAPCD2P3-201ENST00000455031 850 ntBASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 AC007613.1-201ENST00000572811 2597 ntBASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB9Q9Y5E1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 AC011840.4-201ENST00000578471 627 ntBASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
PCDHB9Q9Y5E1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 FLJ13224-201ENST00000313737 1514 ntBASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 AC022898.2-201ENST00000616822 1312 ntBASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 AC112698.1-201ENST00000510299 916 ntBASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 AC092865.5-201ENST00000545435 363 ntBASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms