Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 CROCCP1-201ENST00000426910 5675 ntBASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 AC093010.1-201ENST00000473625 1624 ntBASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 AC097374.2-201ENST00000618617 1306 ntBASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 RNA5SP419-201ENST00000515908 135 ntBASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 AC139887.3-201ENST00000568585 713 ntBASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTDP1Q9Y5B0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 FAM215A-202ENST00000632077 792 ntBASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTDP1Q9Y5B0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CTDP1Q9Y5B0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CTDP1Q9Y5B0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTDP1Q9Y5B0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTDP1Q9Y5B0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTDP1Q9Y5B0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 AP000974.1-201ENST00000623909 2387 ntBASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 SART3-203ENST00000546611 1184 ntBASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 AC021087.4-201ENST00000563761 564 ntBASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 AL139288.1-201ENST00000623748 933 ntBASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTDP1Q9Y5B0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms