Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 AC003669.1-201ENST00000334569 611 ntBASIC20.2■□□□□ 0.82
FBXO40Q9UH90 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 AC073621.1-201ENST00000392730 636 ntBASIC20.2■□□□□ 0.82
FBXO40Q9UH90 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 AC009947.1-201ENST00000444350 727 ntBASIC20.2■□□□□ 0.82
FBXO40Q9UH90 AC136632.2-201ENST00000512891 861 ntBASIC20.2■□□□□ 0.82
FBXO40Q9UH90 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FBXO40Q9UH90 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.19■□□□□ 0.82
FBXO40Q9UH90 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 RNA5SP416-201ENST00000516838 111 ntBASIC20.19■□□□□ 0.82
FBXO40Q9UH90 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
FBXO40Q9UH90 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.18■□□□□ 0.82
FBXO40Q9UH90 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 DDX43P3-201ENST00000441064 443 ntBASIC20.18■□□□□ 0.82
FBXO40Q9UH90 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 AC040169.1-201ENST00000565382 521 ntBASIC20.18■□□□□ 0.82
FBXO40Q9UH90 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 AC132938.5-201ENST00000624980 1813 ntBASIC20.18■□□□□ 0.82
FBXO40Q9UH90 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 WIZP1-201ENST00000531444 2299 ntBASIC20.18■□□□□ 0.82
FBXO40Q9UH90 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.18■□□□□ 0.82
FBXO40Q9UH90 BX276092.7-203ENST00000637198 1536 ntBASIC20.17■□□□□ 0.82
FBXO40Q9UH90 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.17■□□□□ 0.82
FBXO40Q9UH90 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FBXO40Q9UH90 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FBXO40Q9UH90 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FBXO40Q9UH90 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
FBXO40Q9UH90 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FBXO40Q9UH90 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
FBXO40Q9UH90 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
FBXO40Q9UH90 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.17■□□□□ 0.82
FBXO40Q9UH90 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.17■□□□□ 0.82
FBXO40Q9UH90 KLF4P1-201ENST00000412782 1185 ntBASIC20.17■□□□□ 0.82
FBXO40Q9UH90 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.17■□□□□ 0.82
FBXO40Q9UH90 SIGLEC30P-201ENST00000455569 941 ntBASIC20.17■□□□□ 0.82
FBXO40Q9UH90 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms