Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 AL020996.1-203ENST00000536896 2307 ntBASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 AC122714.2-201ENST00000502787 707 ntBASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 AL773604.1-201ENST00000617417 272 ntBASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 HLA-A-201ENST00000376802 1334 ntBASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCF1Q9UBD9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
CLCF1Q9UBD9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLCF1Q9UBD9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 AC018712.1-201ENST00000455767 687 ntBASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 AF186996.4-201ENST00000467186 377 ntBASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 RNA5SP419-201ENST00000515908 135 ntBASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCF1Q9UBD9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 SCARNA2-201ENST00000458748 420 ntBASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCF1Q9UBD9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms