Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 AC007967.3-201ENST00000434308 558 ntBASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.71■■□□□ 1.07
HMG20BQ9P0W2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
HMG20BQ9P0W2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 AP001269.4-201ENST00000609611 512 ntBASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 TP73-AS1-207ENST00000624167 988 ntBASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 AC010460.3-201ENST00000511359 1579 ntBASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMG20BQ9P0W2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 MRPL3P1-201ENST00000400109 1033 ntBASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 AC096633.1-201ENST00000422446 749 ntBASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.69■■□□□ 1.06
HMG20BQ9P0W2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 SLC25A6P4-201ENST00000586535 553 ntBASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.68■■□□□ 1.06
HMG20BQ9P0W2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms