Protein–RNA interactions for Protein: Q9P0I2

EMC3, ER membrane protein complex subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMC3Q9P0I2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
EMC3Q9P0I2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.24■□□□□ 0.19
EMC3Q9P0I2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EMC3Q9P0I2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EMC3Q9P0I2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
EMC3Q9P0I2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
EMC3Q9P0I2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
EMC3Q9P0I2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.23■□□□□ 0.19
EMC3Q9P0I2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 AP000550.4-202ENST00000639755 178 ntBASIC16.23■□□□□ 0.19
EMC3Q9P0I2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 AC124067.4-201ENST00000519691 2379 ntBASIC16.23■□□□□ 0.19
EMC3Q9P0I2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 AC099398.1-201ENST00000567919 2776 ntBASIC16.23■□□□□ 0.19
EMC3Q9P0I2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 IER3-202ENST00000376377 1350 ntBASIC16.23■□□□□ 0.19
EMC3Q9P0I2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.23■□□□□ 0.19
EMC3Q9P0I2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.22■□□□□ 0.19
EMC3Q9P0I2 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 PCED1CP-201ENST00000419887 785 ntBASIC16.22■□□□□ 0.19
EMC3Q9P0I2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 FAM86EP-206ENST00000510506 987 ntBASIC16.22■□□□□ 0.19
EMC3Q9P0I2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 AL024508.2-201ENST00000607749 1894 ntBASIC16.22■□□□□ 0.19
EMC3Q9P0I2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EMC3Q9P0I2 PKD1P1-201ENST00000458669 6805 ntBASIC16.22■□□□□ 0.19
EMC3Q9P0I2 AL513477.1-201ENST00000602865 2407 ntBASIC16.21■□□□□ 0.19
EMC3Q9P0I2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EMC3Q9P0I2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms