Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 AC097374.2-201ENST00000618617 1306 ntBASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRDM9Q9NQV7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 AP000867.3-201ENST00000524675 377 ntBASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRDM9Q9NQV7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 AL845331.1-201ENST00000424978 1190 ntBASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 AC012615.1-201ENST00000565797 1299 ntBASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 MIR3652-201ENST00000579335 131 ntBASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.86■□□□□ 0.29
PRDM9Q9NQV7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRDM9Q9NQV7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms