Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MKKSQ9NPJ1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.9■□□□□ 0.3
MKKSQ9NPJ1 BNIP3P18-201ENST00000593976 575 ntBASIC16.9■□□□□ 0.3
MKKSQ9NPJ1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MKKSQ9NPJ1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.9■□□□□ 0.3
MKKSQ9NPJ1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKKSQ9NPJ1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
MKKSQ9NPJ1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MKKSQ9NPJ1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
MKKSQ9NPJ1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.9■□□□□ 0.3
MKKSQ9NPJ1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKKSQ9NPJ1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKKSQ9NPJ1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKKSQ9NPJ1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.9■□□□□ 0.3
MKKSQ9NPJ1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.9■□□□□ 0.3
MKKSQ9NPJ1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.9■□□□□ 0.3
MKKSQ9NPJ1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MKKSQ9NPJ1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
MKKSQ9NPJ1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
MKKSQ9NPJ1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 NUS1P2-201ENST00000417358 873 ntBASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 AC096582.2-201ENST00000510860 516 ntBASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 AL138831.2-201ENST00000606564 490 ntBASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 IFNL4P1-201ENST00000607083 540 ntBASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 AL732292.2-201ENST00000609649 430 ntBASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKKSQ9NPJ1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 AC135776.1-201ENST00000319817 2481 ntBASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 AC004870.1-201ENST00000315132 882 ntBASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 AC114341.1-201ENST00000618070 349 ntBASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MKKSQ9NPJ1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms