Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 LINC00554-201ENST00000564841 3011 ntBASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IPQ96QF0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 LINC00304-203ENST00000565008 1864 ntBASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 POU5F1P3-201ENST00000428824 1078 ntBASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 HLA-A-209ENST00000638375 975 ntBASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 FLJ16779-201ENST00000612722 7638 ntBASIC17.42■□□□□ 0.38
RAB3IPQ96QF0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 AC060834.1-201ENST00000443027 2032 ntBASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB3IPQ96QF0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms