Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ODF3Q96PU9 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
ODF3Q96PU9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
ODF3Q96PU9 SPDYE15P-201ENST00000424157 909 ntBASIC13.19□□□□□ -0.3
ODF3Q96PU9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.19□□□□□ -0.3
ODF3Q96PU9 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.19□□□□□ -0.3
ODF3Q96PU9 AC112698.1-201ENST00000510299 916 ntBASIC13.19□□□□□ -0.3
ODF3Q96PU9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.19□□□□□ -0.3
ODF3Q96PU9 AC004263.2-201ENST00000617183 678 ntBASIC13.19□□□□□ -0.3
ODF3Q96PU9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
ODF3Q96PU9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.19□□□□□ -0.3
ODF3Q96PU9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.19□□□□□ -0.3
ODF3Q96PU9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF3Q96PU9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.18□□□□□ -0.3
ODF3Q96PU9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ODF3Q96PU9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.18□□□□□ -0.3
ODF3Q96PU9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ODF3Q96PU9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 AC009949.1-201ENST00000623048 1830 ntBASIC13.18□□□□□ -0.3
ODF3Q96PU9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
ODF3Q96PU9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ODF3Q96PU9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.18□□□□□ -0.3
ODF3Q96PU9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ODF3Q96PU9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 TERF1P1-201ENST00000311003 1181 ntBASIC13.18□□□□□ -0.3
ODF3Q96PU9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
ODF3Q96PU9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 MIR662-201ENST00000384847 95 ntBASIC13.18□□□□□ -0.3
ODF3Q96PU9 IGHGP-201ENST00000390555 1178 ntBASIC13.18□□□□□ -0.3
ODF3Q96PU9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 AC005104.2-201ENST00000427818 678 ntBASIC13.18□□□□□ -0.3
ODF3Q96PU9 YBX1P2-201ENST00000489612 999 ntBASIC13.18□□□□□ -0.3
ODF3Q96PU9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.18□□□□□ -0.3
ODF3Q96PU9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.18□□□□□ -0.3
ODF3Q96PU9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.18□□□□□ -0.3
ODF3Q96PU9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ODF3Q96PU9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.18□□□□□ -0.3
ODF3Q96PU9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
ODF3Q96PU9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.18□□□□□ -0.3
ODF3Q96PU9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.18□□□□□ -0.3
ODF3Q96PU9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF3Q96PU9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ODF3Q96PU9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF3Q96PU9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ODF3Q96PU9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ODF3Q96PU9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.17□□□□□ -0.3
ODF3Q96PU9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ODF3Q96PU9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF3Q96PU9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.17□□□□□ -0.3
ODF3Q96PU9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF3Q96PU9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF3Q96PU9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.17□□□□□ -0.3
ODF3Q96PU9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.17□□□□□ -0.3
ODF3Q96PU9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.17□□□□□ -0.3
ODF3Q96PU9 AP003733.1-201ENST00000491725 852 ntBASIC13.17□□□□□ -0.3
ODF3Q96PU9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ODF3Q96PU9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF3Q96PU9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ODF3Q96PU9 ZNF444P1-201ENST00000559497 298 ntBASIC13.17□□□□□ -0.3
ODF3Q96PU9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.17□□□□□ -0.3
ODF3Q96PU9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ODF3Q96PU9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ODF3Q96PU9 GPR32P1-201ENST00000601788 811 ntBASIC13.17□□□□□ -0.3
ODF3Q96PU9 AC011558.1-201ENST00000623459 338 ntBASIC13.17□□□□□ -0.3
ODF3Q96PU9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.17□□□□□ -0.3
ODF3Q96PU9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF3Q96PU9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF3Q96PU9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms