Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP2A3Q93084 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2A3Q93084 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2A3Q93084 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.82■□□□□ 0.6
ATP2A3Q93084 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP2A3Q93084 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP2A3Q93084 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.82■□□□□ 0.6
ATP2A3Q93084 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP2A3Q93084 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2A3Q93084 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2A3Q93084 NOC2LP2-201ENST00000407594 1944 ntBASIC18.82■□□□□ 0.6
ATP2A3Q93084 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP2A3Q93084 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP2A3Q93084 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP2A3Q93084 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2A3Q93084 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2A3Q93084 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2A3Q93084 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2A3Q93084 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2A3Q93084 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ATP2A3Q93084 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2A3Q93084 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2A3Q93084 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
ATP2A3Q93084 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ATP2A3Q93084 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATP2A3Q93084 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ATP2A3Q93084 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP2A3Q93084 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2A3Q93084 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2A3Q93084 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATP2A3Q93084 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ATP2A3Q93084 AC113404.2-201ENST00000507884 177 ntBASIC18.81■□□□□ 0.6
ATP2A3Q93084 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.81■□□□□ 0.6
ATP2A3Q93084 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP2A3Q93084 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ATP2A3Q93084 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2A3Q93084 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2A3Q93084 AP005901.3-202ENST00000581653 237 ntBASIC18.81■□□□□ 0.6
ATP2A3Q93084 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATP2A3Q93084 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP2A3Q93084 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP2A3Q93084 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ATP2A3Q93084 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2A3Q93084 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2A3Q93084 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2A3Q93084 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2A3Q93084 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ATP2A3Q93084 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP2A3Q93084 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
ATP2A3Q93084 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP2A3Q93084 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP2A3Q93084 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A3Q93084 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A3Q93084 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A3Q93084 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ATP2A3Q93084 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A3Q93084 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ATP2A3Q93084 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A3Q93084 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A3Q93084 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A3Q93084 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A3Q93084 NUS1P2-201ENST00000417358 873 ntBASIC18.8■□□□□ 0.6
ATP2A3Q93084 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A3Q93084 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.8■□□□□ 0.6
ATP2A3Q93084 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ATP2A3Q93084 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP2A3Q93084 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A3Q93084 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP2A3Q93084 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
ATP2A3Q93084 AL121912.1-201ENST00000603683 238 ntBASIC18.8■□□□□ 0.6
ATP2A3Q93084 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP2A3Q93084 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP2A3Q93084 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A3Q93084 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ATP2A3Q93084 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP2A3Q93084 AL133373.2-201ENST00000623187 2828 ntBASIC18.8■□□□□ 0.6
ATP2A3Q93084 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A3Q93084 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A3Q93084 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP2A3Q93084 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ATP2A3Q93084 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP2A3Q93084 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP2A3Q93084 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP2A3Q93084 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP2A3Q93084 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP2A3Q93084 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP2A3Q93084 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms