Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC27.53■■■□□ 2
CASKIN1Q8WXD9 AC002310.6-201ENST00000624451 1377 ntBASIC27.53■■■□□ 2
CASKIN1Q8WXD9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CASKIN1Q8WXD9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
CASKIN1Q8WXD9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC27.53■■■□□ 2
CASKIN1Q8WXD9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC27.53■■■□□ 2
CASKIN1Q8WXD9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC27.53■■■□□ 2
CASKIN1Q8WXD9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 AC023274.1-201ENST00000418278 595 ntBASIC27.52■■■□□ 2
CASKIN1Q8WXD9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC27.52■■■□□ 2
CASKIN1Q8WXD9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 ALG1L5P-201ENST00000482043 771 ntBASIC27.52■■■□□ 2
CASKIN1Q8WXD9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC27.52■■■□□ 2
CASKIN1Q8WXD9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC27.51■■■□□ 2
CASKIN1Q8WXD9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■■□□ 2
CASKIN1Q8WXD9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC27.51■■■□□ 2
CASKIN1Q8WXD9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
CASKIN1Q8WXD9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CASKIN1Q8WXD9 MCCD1P2-201ENST00000423228 335 ntBASIC27.51■■□□□ 1.99
CASKIN1Q8WXD9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CASKIN1Q8WXD9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CASKIN1Q8WXD9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
CASKIN1Q8WXD9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CASKIN1Q8WXD9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
CASKIN1Q8WXD9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC27.51■■□□□ 1.99
CASKIN1Q8WXD9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
CASKIN1Q8WXD9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
CASKIN1Q8WXD9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 AC004967.1-201ENST00000453589 447 ntBASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 AC090164.3-201ENST00000610780 2143 ntBASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 PRSS29P-201ENST00000440800 595 ntBASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 AC112482.1-201ENST00000492080 688 ntBASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 IGHV3-52-201ENST00000519770 353 ntBASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 AP001160.2-201ENST00000596071 487 ntBASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 AC010654.1-201ENST00000615722 808 ntBASIC27.5■■□□□ 1.99
CASKIN1Q8WXD9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 YBX1P5-201ENST00000509441 847 ntBASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 MIR4751-201ENST00000578027 74 ntBASIC27.49■■□□□ 1.99
CASKIN1Q8WXD9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CASKIN1Q8WXD9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CASKIN1Q8WXD9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CASKIN1Q8WXD9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CASKIN1Q8WXD9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CASKIN1Q8WXD9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CASKIN1Q8WXD9 HLA-DQB1-201ENST00000374943 1656 ntBASIC27.48■■□□□ 1.99
CASKIN1Q8WXD9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CASKIN1Q8WXD9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC27.48■■□□□ 1.99
CASKIN1Q8WXD9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC27.48■■□□□ 1.99
CASKIN1Q8WXD9 MYCLP1-201ENST00000372451 1075 ntBASIC27.48■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms