Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ARHGEF40Q8TER5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ARHGEF40Q8TER5 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 AC002056.1-201ENST00000395613 760 ntBASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 RN7SL692P-201ENST00000464677 288 ntBASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 HNRNPA1P40-201ENST00000426371 1278 ntBASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 AC140658.5-201ENST00000438532 169 ntBASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 AC079140.1-201ENST00000508039 487 ntBASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 COQ6-210ENST00000554920 649 ntTSL 3 BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 BSG-214ENST00000614867 960 ntTSL 3 BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC26.19■■□□□ 1.78
ARHGEF40Q8TER5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 LINC00982-205ENST00000420957 435 ntBASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 SPDYE14P-201ENST00000442619 822 ntBASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 AL513480.1-201ENST00000451731 511 ntBASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 CR383656.12-201ENST00000549567 513 ntBASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 COQ9-214ENST00000567933 882 ntTSL 3 BASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 AL032819.2-201ENST00000624543 2162 ntBASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC26.18■■□□□ 1.78
ARHGEF40Q8TER5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 AL049812.1-201ENST00000432563 2267 ntBASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 AL358472.5-202ENST00000641448 1267 ntBASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ARHGEF40Q8TER5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ARHGEF40Q8TER5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
ARHGEF40Q8TER5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC26.16■■□□□ 1.78
ARHGEF40Q8TER5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ARHGEF40Q8TER5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC26.16■■□□□ 1.78
ARHGEF40Q8TER5 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC26.16■■□□□ 1.78
ARHGEF40Q8TER5 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC26.16■■□□□ 1.78
ARHGEF40Q8TER5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC26.16■■□□□ 1.78
ARHGEF40Q8TER5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC26.16■■□□□ 1.78
ARHGEF40Q8TER5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
ARHGEF40Q8TER5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
ARHGEF40Q8TER5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
ARHGEF40Q8TER5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC26.16■■□□□ 1.78
ARHGEF40Q8TER5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
ARHGEF40Q8TER5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC26.15■■□□□ 1.78
ARHGEF40Q8TER5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ARHGEF40Q8TER5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ARHGEF40Q8TER5 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ARHGEF40Q8TER5 AC005237.2-201ENST00000434368 219 ntBASIC26.15■■□□□ 1.78
ARHGEF40Q8TER5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ARHGEF40Q8TER5 STK19B-204ENST00000512515 211 ntBASIC26.15■■□□□ 1.78
ARHGEF40Q8TER5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
ARHGEF40Q8TER5 SRP9-204ENST00000619790 377 ntTSL 2 BASIC26.15■■□□□ 1.78
ARHGEF40Q8TER5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC26.15■■□□□ 1.78
ARHGEF40Q8TER5 AC097637.2-201ENST00000624096 1997 ntBASIC26.15■■□□□ 1.78
ARHGEF40Q8TER5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ARHGEF40Q8TER5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ARHGEF40Q8TER5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms