Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD5Q8TDI0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHD5Q8TDI0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD5Q8TDI0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD5Q8TDI0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CHD5Q8TDI0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD5Q8TDI0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.98■□□□□ 0.47
CHD5Q8TDI0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 FAM220CP-201ENST00000395253 831 ntBASIC17.97■□□□□ 0.47
CHD5Q8TDI0 ACTG1P4-201ENST00000425123 1122 ntBASIC17.97■□□□□ 0.47
CHD5Q8TDI0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 AC106795.1-205ENST00000512851 1056 ntBASIC17.97■□□□□ 0.47
CHD5Q8TDI0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 AP001269.4-201ENST00000609611 512 ntBASIC17.97■□□□□ 0.47
CHD5Q8TDI0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHD5Q8TDI0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 AL133373.2-201ENST00000623187 2828 ntBASIC17.96■□□□□ 0.47
CHD5Q8TDI0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 AL049757.1-201ENST00000616842 1596 ntBASIC17.96■□□□□ 0.47
CHD5Q8TDI0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 AC004870.1-201ENST00000315132 882 ntBASIC17.96■□□□□ 0.47
CHD5Q8TDI0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 AL355877.3-201ENST00000622820 899 ntBASIC17.96■□□□□ 0.47
CHD5Q8TDI0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHD5Q8TDI0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 SLC25A1P3-201ENST00000395415 828 ntBASIC17.95■□□□□ 0.46
CHD5Q8TDI0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 AL138688.1-201ENST00000624851 1594 ntBASIC17.95■□□□□ 0.46
CHD5Q8TDI0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms