Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 ATP5G2P1-201ENST00000433580 426 ntBASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 AL645608.8-201ENST00000606034 2086 ntBASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
SMARCC2Q8TAQ2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
SMARCC2Q8TAQ2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMARCC2Q8TAQ2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
SMARCC2Q8TAQ2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMARCC2Q8TAQ2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMARCC2Q8TAQ2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
SMARCC2Q8TAQ2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 CHCHD2P8-201ENST00000429873 447 ntBASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 AC092119.3-201ENST00000612618 583 ntBASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 AC004263.2-201ENST00000617183 678 ntBASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.89■□□□□ 0.93
SMARCC2Q8TAQ2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 KRT18P56-201ENST00000507275 550 ntBASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 NPAP1P7-201ENST00000613027 823 ntBASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCC2Q8TAQ2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.87■□□□□ 0.93
SMARCC2Q8TAQ2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms