Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LMO3Q8TAP4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 AC007967.3-201ENST00000434308 558 ntBASIC19.09■□□□□ 0.65
LMO3Q8TAP4 BX276092.5-203ENST00000456199 560 ntBASIC19.09■□□□□ 0.65
LMO3Q8TAP4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.09■□□□□ 0.65
LMO3Q8TAP4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LMO3Q8TAP4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LMO3Q8TAP4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LMO3Q8TAP4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.08■□□□□ 0.65
LMO3Q8TAP4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LMO3Q8TAP4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LMO3Q8TAP4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LMO3Q8TAP4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.08■□□□□ 0.65
LMO3Q8TAP4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LMO3Q8TAP4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
LMO3Q8TAP4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 AL445228.2-201ENST00000605589 952 ntBASIC19.08■□□□□ 0.64
LMO3Q8TAP4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.08■□□□□ 0.64
LMO3Q8TAP4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 IER3-202ENST00000376377 1350 ntBASIC19.07■□□□□ 0.64
LMO3Q8TAP4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 AC246785.2-201ENST00000432512 513 ntBASIC19.07■□□□□ 0.64
LMO3Q8TAP4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LMO3Q8TAP4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.06■□□□□ 0.64
LMO3Q8TAP4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LMO3Q8TAP4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LMO3Q8TAP4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LMO3Q8TAP4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LMO3Q8TAP4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms