Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 SDHAP2-201ENST00000455183 2001 ntBASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNIP1Q8TAD8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 AC112698.1-201ENST00000510299 916 ntBASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 AL513190.1-201ENST00000621254 727 ntBASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 PMPCAP1-201ENST00000508114 1576 ntBASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 AFG3L1P-217ENST00000557444 2447 ntBASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 SIGLEC16-201ENST00000599858 1437 ntBASIC16.79■□□□□ 0.28
SNIP1Q8TAD8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNIP1Q8TAD8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNIP1Q8TAD8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SNIP1Q8TAD8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNIP1Q8TAD8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.77■□□□□ 0.28
SNIP1Q8TAD8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SNIP1Q8TAD8 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.77■□□□□ 0.28
SNIP1Q8TAD8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNIP1Q8TAD8 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.77■□□□□ 0.28
SNIP1Q8TAD8 CEND1P1-201ENST00000451006 455 ntBASIC16.77■□□□□ 0.28
SNIP1Q8TAD8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.77■□□□□ 0.28
SNIP1Q8TAD8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SNIP1Q8TAD8 AL078644.1-201ENST00000609881 752 ntBASIC16.77■□□□□ 0.28
SNIP1Q8TAD8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SNIP1Q8TAD8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SNIP1Q8TAD8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SNIP1Q8TAD8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SNIP1Q8TAD8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.77■□□□□ 0.28
SNIP1Q8TAD8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SNIP1Q8TAD8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNIP1Q8TAD8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNIP1Q8TAD8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.77■□□□□ 0.27
SNIP1Q8TAD8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SNIP1Q8TAD8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNIP1Q8TAD8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNIP1Q8TAD8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SNIP1Q8TAD8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNIP1Q8TAD8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNIP1Q8TAD8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNIP1Q8TAD8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNIP1Q8TAD8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SNIP1Q8TAD8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SNIP1Q8TAD8 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.76■□□□□ 0.27
SNIP1Q8TAD8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms