Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 AC132938.5-201ENST00000624980 1813 ntBASIC13.83□□□□□ -0.2
LINC01006Q8NI28 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01006Q8NI28 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 CRYGEP-201ENST00000412192 528 ntBASIC13.82□□□□□ -0.2
LINC01006Q8NI28 KRT18P2-201ENST00000447938 1258 ntBASIC13.82□□□□□ -0.2
LINC01006Q8NI28 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 AC006504.4-201ENST00000592118 1568 ntBASIC13.82□□□□□ -0.2
LINC01006Q8NI28 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01006Q8NI28 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 NCF1C-201ENST00000438382 1427 ntBASIC13.81□□□□□ -0.2
LINC01006Q8NI28 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 ELK2BP-201ENST00000415014 1224 ntBASIC13.81□□□□□ -0.2
LINC01006Q8NI28 AC211486.1-202ENST00000416371 468 ntBASIC13.81□□□□□ -0.2
LINC01006Q8NI28 MCCD1P2-201ENST00000423228 335 ntBASIC13.81□□□□□ -0.2
LINC01006Q8NI28 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 DNAJB3-202ENST00000449667 1266 ntBASIC13.81□□□□□ -0.2
LINC01006Q8NI28 SIGLEC30P-201ENST00000455569 941 ntBASIC13.81□□□□□ -0.2
LINC01006Q8NI28 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 AC211476.1-201ENST00000503899 468 ntBASIC13.81□□□□□ -0.2
LINC01006Q8NI28 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01006Q8NI28 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 AC148477.5-201ENST00000625164 1645 ntBASIC13.8□□□□□ -0.2
LINC01006Q8NI28 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC01006Q8NI28 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms