Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 EMBP1-201ENST00000458200 901 ntBASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 AC008687.5-201ENST00000593746 558 ntBASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 MYLKP1-201ENST00000509077 1580 ntBASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CLDND2Q8NHS1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 IGHV3-47-201ENST00000425060 335 ntBASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 AC011840.4-201ENST00000578471 627 ntBASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDND2Q8NHS1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 NSUN5P1-202ENST00000421140 1535 ntBASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 NSUN5P2-203ENST00000457352 1529 ntBASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 ESPNP-201ENST00000270691 2015 ntBASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 AC091607.1-201ENST00000490318 1060 ntBASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 AP005901.3-202ENST00000581653 237 ntBASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.17■□□□□ 0.02
CLDND2Q8NHS1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms