Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TTC16Q8NEE8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC16Q8NEE8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TTC16Q8NEE8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TTC16Q8NEE8 MTCL1P1-201ENST00000446207 792 ntBASIC18.74■□□□□ 0.59
TTC16Q8NEE8 AC132008.2-207ENST00000454517 770 ntBASIC18.74■□□□□ 0.59
TTC16Q8NEE8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.74■□□□□ 0.59
TTC16Q8NEE8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TTC16Q8NEE8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.74■□□□□ 0.59
TTC16Q8NEE8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TTC16Q8NEE8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.74■□□□□ 0.59
TTC16Q8NEE8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC16Q8NEE8 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.74■□□□□ 0.59
TTC16Q8NEE8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TTC16Q8NEE8 ESPNP-201ENST00000270691 2015 ntBASIC18.74■□□□□ 0.59
TTC16Q8NEE8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
TTC16Q8NEE8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC16Q8NEE8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC16Q8NEE8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC16Q8NEE8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC16Q8NEE8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TTC16Q8NEE8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 TP73-AS1-210ENST00000637775 1455 ntBASIC18.73■□□□□ 0.59
TTC16Q8NEE8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 RCN1P2-201ENST00000398357 915 ntBASIC18.73■□□□□ 0.59
TTC16Q8NEE8 AL022342.1-201ENST00000400363 863 ntBASIC18.73■□□□□ 0.59
TTC16Q8NEE8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 AC005336.2-201ENST00000593183 939 ntBASIC18.73■□□□□ 0.59
TTC16Q8NEE8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 REXO1L6P-202ENST00000619970 1078 ntBASIC18.73■□□□□ 0.59
TTC16Q8NEE8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TTC16Q8NEE8 TNXA-203ENST00000507684 2038 ntBASIC18.73■□□□□ 0.59
TTC16Q8NEE8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.72■□□□□ 0.59
TTC16Q8NEE8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 AC009154.2-201ENST00000621177 724 ntBASIC18.72■□□□□ 0.59
TTC16Q8NEE8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.72■□□□□ 0.59
TTC16Q8NEE8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 POM121L3P-201ENST00000419331 1163 ntBASIC18.71■□□□□ 0.59
TTC16Q8NEE8 FAM197Y8-203ENST00000450145 560 ntBASIC18.71■□□□□ 0.59
TTC16Q8NEE8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 SLC25A6P4-201ENST00000586535 553 ntBASIC18.71■□□□□ 0.59
TTC16Q8NEE8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TTC16Q8NEE8 AC120114.3-201ENST00000611923 658 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms