Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 AC100803.2-201ENST00000562459 1963 ntBASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 AC005915.1-201ENST00000624912 2018 ntBASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 AC133552.2-202ENST00000575694 574 ntBASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC197Q8NCU1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 AC006449.5-201ENST00000610658 2098 ntBASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 AC092368.3-202ENST00000574180 1591 ntBASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 MIR149-201ENST00000384879 89 ntBASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 AC034236.2-201ENST00000606662 1610 ntBASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC197Q8NCU1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC197Q8NCU1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
CCDC197Q8NCU1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
CCDC197Q8NCU1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.71■□□□□ 0.42
CCDC197Q8NCU1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.71■□□□□ 0.42
CCDC197Q8NCU1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC197Q8NCU1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms