Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A9Q8NBW4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A9Q8NBW4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A9Q8NBW4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A9Q8NBW4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC38A9Q8NBW4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 RPL13AP23-201ENST00000480739 586 ntBASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 AC122714.2-201ENST00000502787 707 ntBASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 AD001527.2-201ENST00000622994 785 ntBASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 AL139288.1-201ENST00000623748 933 ntBASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 AC004817.3-201ENST00000602957 2129 ntBASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 REXO1L9P-201ENST00000604264 2108 ntBASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC38A9Q8NBW4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 RPS2P28-201ENST00000314255 741 ntBASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 AC106730.1-201ENST00000566722 1090 ntBASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 MTDHP4-201ENST00000600287 670 ntBASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC38A9Q8NBW4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC38A9Q8NBW4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC38A9Q8NBW4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SLC38A9Q8NBW4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC38A9Q8NBW4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC38A9Q8NBW4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC38A9Q8NBW4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC38A9Q8NBW4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.77■□□□□ 0.27
SLC38A9Q8NBW4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC38A9Q8NBW4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.77■□□□□ 0.27
SLC38A9Q8NBW4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.77■□□□□ 0.27
SLC38A9Q8NBW4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC38A9Q8NBW4 SIRPAP1-201ENST00000448467 1770 ntBASIC16.77■□□□□ 0.27
SLC38A9Q8NBW4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 COX5BP2-201ENST00000392354 334 ntBASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 OR7E14P-202ENST00000530490 1290 ntBASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 AC023511.2-201ENST00000618803 211 ntBASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 AC079776.2-201ENST00000641154 1609 ntBASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC38A9Q8NBW4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms