Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 TSPY5P-201ENST00000426936 936 ntBASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 AC138932.1-201ENST00000534164 6830 ntBASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 CICP6-201ENST00000457191 2729 ntBASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LSMEM1Q8N8F7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 RNF152P1-201ENST00000397754 604 ntBASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 AC009154.2-201ENST00000621177 724 ntBASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSMEM1Q8N8F7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 MIR662-201ENST00000384847 95 ntBASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 AC211429.1-201ENST00000415277 523 ntBASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 LINC01023-201ENST00000606054 436 ntBASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSMEM1Q8N8F7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSMEM1Q8N8F7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms