Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 AC136632.2-201ENST00000512891 861 ntBASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 AC022898.2-201ENST00000616822 1312 ntBASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEFF1Q8IYR6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 CROCCP3-202ENST00000420820 1947 ntBASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 AD001527.2-201ENST00000622994 785 ntBASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 AC073592.4-201ENST00000623827 446 ntBASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 KRT18P28-201ENST00000453838 1332 ntBASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 AC093503.3-201ENST00000624917 2352 ntBASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEFF1Q8IYR6 TNXA-203ENST00000507684 2038 ntBASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 AC122714.2-201ENST00000502787 707 ntBASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TMEFF1Q8IYR6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
TMEFF1Q8IYR6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms