Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 AC018470.1-201ENST00000624790 3129 ntBASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM48Q8IWZ4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.52■□□□□ 0.39
TRIM48Q8IWZ4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM48Q8IWZ4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM48Q8IWZ4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM48Q8IWZ4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM48Q8IWZ4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TRIM48Q8IWZ4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM48Q8IWZ4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM48Q8IWZ4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM48Q8IWZ4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM48Q8IWZ4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 PHGDH-209ENST00000641074 1780 ntBASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRIM48Q8IWZ4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 RN7SL510P-201ENST00000581311 263 ntBASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 AL353801.3-201ENST00000609898 542 ntBASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM48Q8IWZ4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms