Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VRK3Q8IV63 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.44■□□□□ 0.38
VRK3Q8IV63 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.44■□□□□ 0.38
VRK3Q8IV63 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.44■□□□□ 0.38
VRK3Q8IV63 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.44■□□□□ 0.38
VRK3Q8IV63 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.44■□□□□ 0.38
VRK3Q8IV63 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VRK3Q8IV63 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VRK3Q8IV63 AC125634.1-201ENST00000438758 1403 ntBASIC17.44■□□□□ 0.38
VRK3Q8IV63 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VRK3Q8IV63 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
VRK3Q8IV63 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VRK3Q8IV63 AC010460.3-201ENST00000511359 1579 ntBASIC17.44■□□□□ 0.38
VRK3Q8IV63 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.44■□□□□ 0.38
VRK3Q8IV63 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
VRK3Q8IV63 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VRK3Q8IV63 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VRK3Q8IV63 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.44■□□□□ 0.38
VRK3Q8IV63 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VRK3Q8IV63 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VRK3Q8IV63 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VRK3Q8IV63 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VRK3Q8IV63 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK3Q8IV63 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VRK3Q8IV63 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK3Q8IV63 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK3Q8IV63 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
VRK3Q8IV63 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK3Q8IV63 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK3Q8IV63 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.43■□□□□ 0.38
VRK3Q8IV63 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK3Q8IV63 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.43■□□□□ 0.38
VRK3Q8IV63 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VRK3Q8IV63 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.43■□□□□ 0.38
VRK3Q8IV63 AC246785.2-201ENST00000432512 513 ntBASIC17.43■□□□□ 0.38
VRK3Q8IV63 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VRK3Q8IV63 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VRK3Q8IV63 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.43■□□□□ 0.38
VRK3Q8IV63 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK3Q8IV63 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.43■□□□□ 0.38
VRK3Q8IV63 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.43■□□□□ 0.38
VRK3Q8IV63 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK3Q8IV63 AL138831.2-201ENST00000606564 490 ntBASIC17.43■□□□□ 0.38
VRK3Q8IV63 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VRK3Q8IV63 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK3Q8IV63 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
VRK3Q8IV63 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK3Q8IV63 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK3Q8IV63 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.43■□□□□ 0.38
VRK3Q8IV63 AL355312.1-201ENST00000407115 2176 ntBASIC17.43■□□□□ 0.38
VRK3Q8IV63 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
VRK3Q8IV63 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK3Q8IV63 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.43■□□□□ 0.38
VRK3Q8IV63 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.43■□□□□ 0.38
VRK3Q8IV63 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VRK3Q8IV63 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
VRK3Q8IV63 REXO1L11P-201ENST00000620964 1927 ntBASIC17.43■□□□□ 0.38
VRK3Q8IV63 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK3Q8IV63 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
VRK3Q8IV63 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VRK3Q8IV63 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK3Q8IV63 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK3Q8IV63 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK3Q8IV63 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK3Q8IV63 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK3Q8IV63 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK3Q8IV63 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 AC096633.1-201ENST00000422446 749 ntBASIC17.42■□□□□ 0.38
VRK3Q8IV63 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 AC092329.2-201ENST00000598402 547 ntBASIC17.42■□□□□ 0.38
VRK3Q8IV63 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 AC116407.2-201ENST00000613639 860 ntBASIC17.42■□□□□ 0.38
VRK3Q8IV63 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK3Q8IV63 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK3Q8IV63 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VRK3Q8IV63 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK3Q8IV63 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK3Q8IV63 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK3Q8IV63 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK3Q8IV63 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK3Q8IV63 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK3Q8IV63 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.42■□□□□ 0.38
VRK3Q8IV63 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VRK3Q8IV63 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms