Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 NEFHP1-201ENST00000412845 2629 ntBASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 FAM220CP-201ENST00000395253 831 ntBASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 UNC93B7-201ENST00000509439 705 ntBASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRTM4Q86VH4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 INTS4P1-201ENST00000438455 1935 ntBASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 AC010460.3-201ENST00000511359 1579 ntBASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRTM4Q86VH4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRTM4Q86VH4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms