Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 HLA-F-220ENST00000434407 884 ntBASIC16.47■□□□□ 0.23
ZNF550Q7Z398 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF550Q7Z398 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF550Q7Z398 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.47■□□□□ 0.23
ZNF550Q7Z398 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF550Q7Z398 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF550Q7Z398 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.47■□□□□ 0.23
ZNF550Q7Z398 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ZNF550Q7Z398 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
ZNF550Q7Z398 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF550Q7Z398 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF550Q7Z398 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF550Q7Z398 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ZNF550Q7Z398 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF550Q7Z398 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ZNF550Q7Z398 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF550Q7Z398 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF550Q7Z398 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF550Q7Z398 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 LINC00896-202ENST00000609602 2128 ntBASIC16.46■□□□□ 0.23
ZNF550Q7Z398 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF550Q7Z398 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
ZNF550Q7Z398 AC005332.1-201ENST00000577698 1310 ntBASIC16.45■□□□□ 0.22
ZNF550Q7Z398 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 VENTXP5-201ENST00000523979 775 ntBASIC16.45■□□□□ 0.22
ZNF550Q7Z398 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.45■□□□□ 0.22
ZNF550Q7Z398 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.45■□□□□ 0.22
ZNF550Q7Z398 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF550Q7Z398 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF550Q7Z398 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
ZNF550Q7Z398 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ZNF550Q7Z398 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
ZNF550Q7Z398 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF550Q7Z398 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms