Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 AL049840.3-201ENST00000602669 611 ntBASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 OR6D1P-202ENST00000641007 5290 ntBASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 HLA-J-201ENST00000462773 1622 ntBASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 RPL13AP23-201ENST00000480739 586 ntBASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 OR7E14P-202ENST00000530490 1290 ntBASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 AC145285.3-201ENST00000564603 959 ntBASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 AC025062.2-201ENST00000605477 670 ntBASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 AC073592.4-201ENST00000623827 446 ntBASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 AC116407.3-201ENST00000623905 1129 ntBASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf139Q6ZV77 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.37□□□□□ -0.11
C9orf139Q6ZV77 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms