Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.73■□□□□ 0.59
RNF43Q68DV7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF43Q68DV7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF43Q68DV7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF43Q68DV7 AL160237.2-201ENST00000556165 472 ntBASIC18.73■□□□□ 0.59
RNF43Q68DV7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF43Q68DV7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF43Q68DV7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF43Q68DV7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RNF43Q68DV7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF43Q68DV7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF43Q68DV7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF43Q68DV7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF43Q68DV7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF43Q68DV7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF43Q68DV7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF43Q68DV7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RNF43Q68DV7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF43Q68DV7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
RNF43Q68DV7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RNF43Q68DV7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
RNF43Q68DV7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RNF43Q68DV7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF43Q68DV7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF43Q68DV7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF43Q68DV7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF43Q68DV7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RNF43Q68DV7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF43Q68DV7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF43Q68DV7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF43Q68DV7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF43Q68DV7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF43Q68DV7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RNF43Q68DV7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF43Q68DV7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF43Q68DV7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF43Q68DV7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF43Q68DV7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF43Q68DV7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF43Q68DV7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RNF43Q68DV7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF43Q68DV7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF43Q68DV7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF43Q68DV7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF43Q68DV7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF43Q68DV7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF43Q68DV7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF43Q68DV7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF43Q68DV7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF43Q68DV7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF43Q68DV7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF43Q68DV7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF43Q68DV7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF43Q68DV7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF43Q68DV7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF43Q68DV7 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.71■□□□□ 0.59
RNF43Q68DV7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF43Q68DV7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF43Q68DV7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RNF43Q68DV7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF43Q68DV7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF43Q68DV7 AC079776.4-201ENST00000511039 504 ntBASIC18.71■□□□□ 0.59
RNF43Q68DV7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF43Q68DV7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF43Q68DV7 AL732292.2-201ENST00000609649 430 ntBASIC18.71■□□□□ 0.59
RNF43Q68DV7 AL121772.3-201ENST00000610840 674 ntBASIC18.71■□□□□ 0.59
RNF43Q68DV7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF43Q68DV7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF43Q68DV7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF43Q68DV7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF43Q68DV7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF43Q68DV7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF43Q68DV7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
RNF43Q68DV7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF43Q68DV7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF43Q68DV7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RNF43Q68DV7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF43Q68DV7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF43Q68DV7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF43Q68DV7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF43Q68DV7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF43Q68DV7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF43Q68DV7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF43Q68DV7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF43Q68DV7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF43Q68DV7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF43Q68DV7 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF43Q68DV7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF43Q68DV7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF43Q68DV7 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF43Q68DV7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF43Q68DV7 SLC25A6P5-201ENST00000435663 894 ntBASIC18.7■□□□□ 0.58
RNF43Q68DV7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF43Q68DV7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF43Q68DV7 AC091304.2-201ENST00000564639 760 ntBASIC18.7■□□□□ 0.58
RNF43Q68DV7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.7■□□□□ 0.58
RNF43Q68DV7 AC104692.2-201ENST00000603054 253 ntBASIC18.7■□□□□ 0.58
RNF43Q68DV7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF43Q68DV7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF43Q68DV7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms