Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 KRT18P57-201ENST00000443599 1254 ntBASIC18.53■□□□□ 0.56
LRRC38Q5VT99 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 LINC01023-201ENST00000606054 436 ntBASIC18.53■□□□□ 0.56
LRRC38Q5VT99 AL390719.2-201ENST00000606993 987 ntBASIC18.53■□□□□ 0.56
LRRC38Q5VT99 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC38Q5VT99 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC38Q5VT99 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC38Q5VT99 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC38Q5VT99 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC38Q5VT99 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC38Q5VT99 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC38Q5VT99 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC38Q5VT99 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC38Q5VT99 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC38Q5VT99 AC096633.1-201ENST00000422446 749 ntBASIC18.52■□□□□ 0.56
LRRC38Q5VT99 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC38Q5VT99 AC112907.2-201ENST00000448639 330 ntBASIC18.52■□□□□ 0.56
LRRC38Q5VT99 AL359075.1-203ENST00000462729 1002 ntBASIC18.52■□□□□ 0.56
LRRC38Q5VT99 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.52■□□□□ 0.56
LRRC38Q5VT99 AC005332.3-201ENST00000589904 676 ntBASIC18.52■□□□□ 0.56
LRRC38Q5VT99 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LRRC38Q5VT99 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
LRRC38Q5VT99 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC38Q5VT99 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.52■□□□□ 0.55
LRRC38Q5VT99 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC38Q5VT99 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC38Q5VT99 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC38Q5VT99 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 CROCCP2-202ENST00000412962 2773 ntBASIC18.51■□□□□ 0.55
LRRC38Q5VT99 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC38Q5VT99 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 AC097374.2-201ENST00000618617 1306 ntBASIC18.5■□□□□ 0.55
LRRC38Q5VT99 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 LINC01311-201ENST00000565162 1445 ntBASIC18.5■□□□□ 0.55
LRRC38Q5VT99 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 PRORSD1P-202ENST00000563365 2154 ntBASIC18.5■□□□□ 0.55
LRRC38Q5VT99 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 AC063952.2-201ENST00000498792 1227 ntBASIC18.5■□□□□ 0.55
LRRC38Q5VT99 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.5■□□□□ 0.55
LRRC38Q5VT99 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms